Appendix C — Source data

The source data available in this repository (DC 2019-0054) can be located in the data-raw folder. For persistance, the data set is also published on Zenodo with the following doi: https://doi.org/10.5281/zenodo.7554815.

The following sections provide a short overview of the data dictionary which accompanies the source data, and a short description of the data.

C.1 Data dictionary

The data dictionary provides an overview of the collected data. First, we read and display the data dictionary below providing an overview of the collected measurements.

The variable name and label are displayed alongside the measurement scale and units as well as remarks and relevant study information from_paper.

variable	label	scale_of_measurement	units
ID	Patient Identification	nominal	1-14691
SEX	Patient sex	nominal	1=male, 2=female
AGE	Patient Age	continuous	years
MCV	Mean corpuscular volume	continuous	pg
HGB	Haemoglobin	continuous	G/L
HCT	Haematocrit	continuous	%
PLT	Blood platelets	continuous	G/L
MCH	Mean corpuscular hemoglobin	continuous	fl
MCHC	Mean corpuscular hemoglobin concentration	continuous	g/dl
RDW	Red blood cell distribution width	continuous	%
MPV	Mean platelet volume	continuous	fl
LYM	Lymphocytes	continuous	G/L
MONO	Monocytes	continuous	G/L
EOS	Eosinophils	continuous	G/L
BASO	Basophiles	continuous	G/L
NT	Normotest	continuous	%
APTT	Activated partial thromboplastin time	continuous	sec
FIB	Fibrinogen	continuous	mg/dl
SODIUM	Sodium	continuous	mmol/L
POTASS	Potassium	continuous	mmol/L
CA	Calcium	continuous	mmol/L
PHOS	Phosphate	continuous	mmol/L
MG	Magnesium	continuous	mmol/L
CREA	Creatinine	continuous	mg/dl
BUN	Blood urea nitrogen	continuous	mg/dl
HS	Uric acid	continuous	mg/dl
GBIL	Bilirubin	continuous	mg/dl
TP	Total protein	continuous	G/L
ALB	Albumin	continuous	G/L
AMY	Amylase	continuous	U/L
PAMY	Pancreas amylase	continuous	U/L
LIP	Lipases	continuous	U/L
CHE	Cholinesterase	continuous	kU/L
AP	Alkaline phosphatase	continuous	U/L
ASAT	Aspartate transaminase	continuous	U/L
ALAT	Alanin transaminase	continuous	U/L
GGT	Gamma-glutamyl transpeptidase	continuous	G/L
LDH	Lactate dehydrogenase	continuous	U/L
CK	Creatinine kinases	continuous	U/L
GLU	Glucoses	continuous	mg/dl
TRIG	Triclyceride	continuous	mg/dl
CHOL	Cholesterol	continuous	mg/dl
CRP	C-reactive protein	continuous	mg/dl
BASOR	Basophile ratio	continuous	%
EOSR	Eosinophil ratio	continuous	%
LYMR	Lymphocyte ratio	continuous	% (mg/dl)
MONOR	Monocyte ratio	continuous	%
NEU	Neutrophiles	continuous	G/L
NEUR	Neutrophile ratio	continuous	%
PDW	Platelet distribution width	continuous	%
RBC	Red blood count	continuous	T/L
WBC	White blood count	continuous	G/L
BloodCulture	Blood culture result for bacteremia	nominal	no, yes

We do not display all observations measured as it is too wide and long to fit reasonably in to the report. However, we refer you to the Zenodo page for an interactive overview of the source data.